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rs657118 chr11:118083366 A>G

Sequence
accctctcttccgagagagttcac[A/G]caggtcacacgacatcacctccgg
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
HDAC1_HUMAN SMCA4_HUMAN ARI1B_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
HDAC1_HUMAN -0.94 1.93 1.000.01 2.00 n/a n/a
SMCA4_HUMAN -1.51 1.50 1.000.03 2.00 n/a n/a
ARI1B_HUMAN -3.17 2.26 1.000.04 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (geographic atrophy) diastolic blood pressure (dbp)
GTEx eQTL Adipose_Visceral_Omentum Adrenal_Gland Artery_Tibial Brain_Cortex Brain_Frontal_Cortex_BA9 Colon_Transverse Minor_Salivary_Gland Nerve_Tibial Pituitary Thyroid Whole_Blood

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