rs657449 chr7:54546892 A>G
- Sequence
ccgcgaaggctatgctcgcgtggg[A/G]gcgggtggtcgggcgggcctggcg
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) foreskin keratinocyte 786-O (renal carcinoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.85 | 1.79 | 1.76 | 3.00 | Concordant |
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Motif analysis
