ADASTRA v1.6.10
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adastra.autosome.org
rs657635
chr15:48590769
A
>
C
Sequence
ctctaatgaactaaggattatttc[A/C]atcctctcatttttattctactcc
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
NCOR1_HUMAN
KDM1A_HUMAN
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Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
NCOR1_HUMAN
-1.10
1.91
1.00
0.02
2.00
n/a
n/a
KDM1A_HUMAN
-1.21
1.70
1.00
0.04
2.00
n/a
n/a
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
2 hour glucose
,
eye color
,
ldl cholesterol change with statins
,
total cholesterol change with statins
GTEx eQTL
Breast_Mammary_Tissue
,
Cells_Cultured_fibroblasts
,
Nerve_Tibial
,
Testis
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)