rs657737 chr1:236349892 G>A
- Sequence
ttggaagattgaggcaggcagatc[G/A]cctgaggtcaggagttcaagacca
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- TIF1A_HUMAN MTA3_HUMAN ZNF24_HUMAN NCOA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TIF1A_HUMAN | 2.22 | n/a | 2.75 | n/a | n/a | |||
| MTA3_HUMAN | 2.56 | n/a | 3.00 | n/a | n/a | |||
| ZNF24_HUMAN | 1.35 | -3.29 | 2.75 | n/a | n/a | |||
| NCOA1_HUMAN | 2.10 | n/a | 2.83 | n/a | n/a | |||
| TAL1_HUMAN | 2.47 | -0.78 | 2.67 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Brain_Caudate_basal_ganglia, Cells_Cultured_fibroblasts, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Muscle_Skeletal, Nerve_Tibial, Testis