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rs659580 chr1:170664755 T>C

Sequence
gcggcggactctctttacttcggc[T/C]aggcaccggctcggttcatcccgc
ASB in cell types
A673 (Ewing sarcoma)

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
A673 (Ewing sarcoma) 2.00 -2.47 0.031.00 1.50
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Motif analysis

No data available

Genetic associations

EMBL-EBI lobe attachment (rater-scored or self-reported) response to angiotensin ii receptor blocker therapy
GRASP bipolar disorder blood pressure response to candesartan treatment blood pressure response to hydrochlorothiazide treatment late onset alzheimers disease schizophrenia
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Artery_Aorta Artery_Coronary Artery_Tibial Brain_Anterior_cingulate_cortex_BA24 Brain_Caudate_basal_ganglia Brain_Cerebellar_Hemisphere Brain_Cerebellum Brain_Cortex Brain_Frontal_Cortex_BA9 Brain_Hippocampus Brain_Hypothalamus Brain_Nucleus_accumbens_basal_ganglia Brain_Putamen_basal_ganglia Brain_Substantia_nigra Breast_Mammary_Tissue Cells_Cultured_fibroblasts Colon_Sigmoid Colon_Transverse Esophagus_Gastroesophageal_Junction Esophagus_Mucosa Esophagus_Muscularis Heart_Atrial_Appendage Heart_Left_Ventricle Lung Minor_Salivary_Gland Muscle_Skeletal Nerve_Tibial Ovary Pituitary Prostate Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Testis Thyroid Uterus Vagina

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