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rs659639 chr5:39264781 A>G

Sequence
gatgttttataagctgctgtagtg[A/G]ttcccatgtgcagccagagtagag
ASB in cell types
GM12878 (female B-cells)
ASB for transcription factors
MEF2B_HUMAN ZN687_HUMAN IKZF1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MEF2B_HUMAN n/a 2.97 1.005.7·10-10 1.33 n/a No Hit
ZN687_HUMAN n/a 2.26 1.001.8·10-3 1.33 n/a n/a
IKZF1_HUMAN -1.18 1.47 1.000.01 1.33 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP bone mineral density (bmd) infant head circumference mitral annular calcium partial epilepsy resistance to kuru in aged women despite likely exposure serum creatinine
GTEx eQTL Cells_EBV-transformed_lymphocytes

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