rs659782 chr1:109275325 C>T
- Sequence
tgacgcccttccccttgccccagg[C/T]catcatctccccacctctcctccc
- ASB for transcription factors
- ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 1.83 | n/a | 2.50 | 2.57 | Discordant |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adrenal_Gland, Artery_Aorta, Artery_Tibial, Brain_Frontal_Cortex_BA9, Colon_Sigmoid, Colon_Transverse, Heart_Atrial_Appendage, Lung, Muscle_Skeletal, Pituitary, Skin_Sun_Exposed_Lower_leg, Stomach, Testis, Thyroid