ADASTRA v1.6.10
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rs660613
chr20:49774907
A
>
G
Sequence
ggaaaaaatgaaacaaactagaaa[A/G]aacaaaatgagaagaatgtagact
ASB in cell types
PC3 (prostate carcinoma)
HepG2 (hepatoblastoma)
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Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
PC3 (prostate carcinoma)
n/a
2.66
1.00
9.5·10
-4
2.50
HepG2 (hepatoblastoma)
0.39
0.74
0.95
5.9·10
-3
1.26
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Motif analysis
No data available
Genetic associations
GRASP
chronic kidney disease
,
fasting insulin
,
homa-b
,
infant head circumference
,
total cholesterol
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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