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rs662423 chr1:186245058 G>T

Sequence
ccgctgctttcaccggctggcgtt[G/T]agcgtctgtggcttttccaggcac
ASB in cell types
LNCaP (prostate carcinoma) bipolar neuron LNCaP C4-2B (prostate carcinoma) IPSC-derived bipolar neuron
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 2.15 -0.15 2.0·10-261.00 1.28 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Heart_Left_Ventricle Lung Nerve_Tibial Testis

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