rs662786 chr1:186244998 T>C
- Sequence
tgggctcctacagctttgggcagc[T/C]ccaccctgtggctttgcagggtac
- ASB in cell types
- LNCaP (prostate carcinoma) bipolar neuron 22RV1 (prostate carcinoma) IPSC-derived bipolar neuron
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.15 | -0.90 | 1.31 | -1.56 | Weak Concordant |
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Motif analysis
