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rs663096 chr1:22634422 A>G

Sequence
ccccgaaaagggagtcacagctcc[A/G]gcttggggagctcccaggtctggg
ASB in cell types
ICN12 (primary pre-B acute lymphomablastic leukemia)
ASB for transcription factors
PBX1_HUMAN TFE2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PBX1_HUMAN -2.91 2.20 1.002.6·10-3 1.50 n/a No Hit
TFE2_HUMAN -1.62 1.78 1.000.05 1.50 -1.90 Weak Discordant
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Motif analysis

TFE2_HUMAN Weak Discordant
TFE2_HUMAN pic

Genetic associations

GTEx eQTL Brain_Cerebellum

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