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rs6631916 chrX:15198915 G>C

Sequence
tcttgtgagacttattcactgtca[G/C]aagaacagcatgggaaaaacctgc
ASB in cell types
GM12878 (female B-cells)
ASB for transcription factors
IKZF1_HUMAN IKZF2_HUMAN MEF2B_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF1_HUMAN n/a 3.10 1.007.8·10-6 2.50 n/a No Hit
IKZF2_HUMAN -2.17 2.29 1.003.9·10-4 3.00 n/a n/a
MEF2B_HUMAN n/a 2.60 1.005.1·10-3 2.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous Artery_Tibial Cells_Cultured_fibroblasts

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