rs663465 chr1:70411075 G>A
- Sequence
ggactaacaccacttggacccagg[G/A]actccagcttcactccgctttgtg
- ASB in cell types
- K562 (myelogenous leukemia) MCF7 (Invasive ductal breast carcinoma) GM12878 (female B-cells) CD14+ monocytes
- ASB for transcription factors
- ELF1_HUMAN MYNN_HUMAN RFOX2_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ELF1_HUMAN | 0.16 | 1.89 | 1.67 | 4.85 | Concordant | |||
| MYNN_HUMAN | 2.24 | n/a | 1.50 | n/a | n/a | |||
| RFOX2_HUMAN | 1.28 | -1.69 | 1.42 | n/a | n/a |
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Motif analysis
