ADASTRA v1.6.10
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Soos
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adastra.autosome.org
rs664354
chr12:52428208
A
>
G
Sequence
cccctaggaatgcccaggaagctg[A/G]ggtgagctcaacttgctttgagga
ASB in cell types
LNCaP (prostate carcinoma)
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View in PheLiGe
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
LNCaP (prostate carcinoma)
1.04
-0.53
0.04
1.00
1.00
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
advanced age-related macular degeneration (geographic atrophy)
,
aspirin-exacerbated respiratory disease
GTEx eQTL
Brain_Hippocampus
,
Skin_Sun_Exposed_Lower_leg
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale