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rs668234 chr1:23188974 G>A

Sequence
gggaacaggattggctgcagggtg[G/A]gcactctgcagtgtctgcccactt
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
MEIS2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MEIS2_HUMAN -1.93 1.74 1.003.8·10-3 1.33 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous Artery_Aorta Artery_Tibial Brain_Caudate_basal_ganglia Brain_Cortex Brain_Frontal_Cortex_BA9 Brain_Nucleus_accumbens_basal_ganglia Brain_Putamen_basal_ganglia Cells_Cultured_fibroblasts Esophagus_Gastroesophageal_Junction Esophagus_Muscularis Heart_Atrial_Appendage Muscle_Skeletal Nerve_Tibial Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Testis

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