rs6684539 chr1:11908216 A>G
- Sequence
tttactaaagatttccgtggagag[A/G]aacgagtgtgagtctgaaaccaat
- ASB in cell types
- HepG2 (hepatoblastoma) upper lobe of left lung D341 Med (medulloblastoma) adrenal gland
- ASB for transcription factors
- NDF1_HUMAN FOXA2_HUMAN MAF_HUMAN KMT2A_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NDF1_HUMAN | 1.26 | -0.27 | 1.42 | n/a | No Hit | |||
| FOXA2_HUMAN | -2.26 | 2.03 | 1.50 | n/a | No Hit | |||
| MAF_HUMAN | -3.64 | 2.14 | 2.50 | n/a | No Hit | |||
| KMT2A_HUMAN | 1.97 | -1.62 | 1.50 | n/a | n/a | |||
| SP1_HUMAN | 1.06 | 0.24 | 1.31 | n/a | No Hit |
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