rs6687726 chr1:154427844 A>G
- Sequence
aggacagcctgccaagtatgagat[A/G]aaaacgcctcataaacaagaaggg
- ASB in cell types
- CD34+ bone marrow cell-derived erythroid progenitors HEK293 (embryonic kidney)
- ASB for transcription factors
- GATA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GATA1_HUMAN | 2.34 | -1.20 | 3.17 | -3.53 | Concordant |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Tibial, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Lung, Pituitary, Testis, Thyroid, Whole_Blood