rs6690563 chr1:201461146 G>A
- Sequence
agttcttgggtcaatatcttgcac[G/A]gagtaaacactatataccacttgt
- ASB in cell types
- K562 (myelogenous leukemia) breast tumor tissue prostate tumor
- ASB for transcription factors
- FOXA1_HUMAN PBX2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 2.08 | n/a | 2.00 | 5.83 | Discordant | |||
| PBX2_HUMAN | n/a | 2.35 | 2.50 | n/a | No Hit |
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Motif analysis
