rs6691952 chr1:210598056 A>G
- Sequence
tgtcaacaggtgatttattttgtc[A/G]ggactgcatccttcccttcaaagc
- ASB in cell types
- A549 (lung carcinoma) HEK293 (embryonic kidney) keratinocytes
- ASB for transcription factors
- SNAI2_HUMAN JUN_HUMAN EP300_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SNAI2_HUMAN | 2.34 | -2.38 | 1.33 | n/a | No Hit | |||
| JUN_HUMAN | -0.17 | 1.19 | 1.94 | n/a | No Hit | |||
| EP300_HUMAN | -0.46 | 1.48 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP college completion, fasting blood glucose, hdl cholesterol, irritible bowel syndrome, serum creatinine, years of education