rs669405 chr1:31870111 T>A
- Sequence
tactcaggaggctgaggtaggagg[T/A]tcgcttgaacctaggaggtggagg
- ASB for transcription factors
- ZN770_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN770_HUMAN | -1.80 | 2.15 | 2.00 | 5.71 | Concordant |
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Motif analysis
Genetic associations
GTEx eQTL Artery_Tibial, Brain_Substantia_nigra, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Heart_Atrial_Appendage, Testis, Thyroid