rs6696332 chr1:114757749 T>C
- Sequence
cgacctgacatgaggcccaggcag[T/C]tgaacgggagacgtatgaaaaagc
- ASB in cell types
- HEK293 (embryonic kidney) MCF7 (Invasive ductal breast carcinoma) K562 (myelogenous leukemia) GM12878 (female B-cells)
- ASB for transcription factors
- CLOCK_HUMAN CTCF_HUMAN NFXL1_HUMAN CREB1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CLOCK_HUMAN | n/a | 1.62 | 5.50 | n/a | No Hit | |||
| CTCF_HUMAN | 0.77 | 0.19 | 1.54 | n/a | No Hit | |||
| NFXL1_HUMAN | -0.26 | 1.70 | 2.89 | n/a | n/a | |||
| CREB1_HUMAN | 0.20 | 2.51 | 4.50 | n/a | No Hit | |||
| NCOA3_HUMAN | n/a | 1.89 | 5.50 | n/a | n/a |
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