ADASTRA v1.6.10
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rs669929
chr6:153143371
C
>
T
Sequence
tcccttccccacctccttgtgcta[C/T]ggtccagttccacagggtgggagg
ASB in cell types
HT29 (colon adenocarcinoma)
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View in PheLiGe
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HT29 (colon adenocarcinoma)
1.55
-0.39
0.03
1.00
2.00
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
adiponectin levels
,
hdl cholesterol
,
years of education
GTEx eQTL
Adipose_Subcutaneous
,
Adipose_Visceral_Omentum
,
Brain_Cerebellum
,
Breast_Mammary_Tissue
,
Cells_Cultured_fibroblasts
,
Esophagus_Mucosa
,
Minor_Salivary_Gland
,
Prostate
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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