ADASTRA v1.6.10
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adastra.autosome.org
rs669949
chr11:125114592
C
>
T
Sequence
gcaaatggagcagctcagtggggc[C/T]gtgctgcacctagattcagagctg
ASB for transcription factors
CTCF_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN
1.17
-0.38
0.04
1.00
2.06
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
adiponectin levels
,
fasting insulin
,
homa-b
,
homa-ir
,
infant head circumference
,
serum creatinine
GTEx eQTL
Artery_Tibial
,
Brain_Hypothalamus
,
Brain_Nucleus_accumbens_basal_ganglia
,
Brain_Putamen_basal_ganglia
,
Cells_Cultured_fibroblasts
,
Nerve_Tibial
,
Pituitary
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)