ADASTRA v1.6.10
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adastra.autosome.org
rs670906
chr11:119381489
T
>
G
Sequence
gcacgtacctgcctcttcttggag[T/G]atggacgagtcgaaccgggcacaa
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
NRF1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
NRF1_HUMAN
-0.25
1.81
1.00
0.05
2.00
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
cystatin c in serum
,
refractive error
GTEx eQTL
Adipose_Subcutaneous
,
Adrenal_Gland
,
Artery_Tibial
,
Breast_Mammary_Tissue
,
Cells_Cultured_fibroblasts
,
Colon_Sigmoid
,
Esophagus_Mucosa
,
Esophagus_Muscularis
,
Heart_Left_Ventricle
,
Lung
,
Pituitary
,
Thyroid
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)