rs671131 chr1:207885033 C>A
- Sequence
aattctgggtgattgggcaagcca[C/A]ctcccttctctgagccttagtttg
- ASB in cell types
- HEK293 (embryonic kidney) neural cell 22RV1 (prostate carcinoma) OCI-LY7 (diffuse large B-cell lymphoma)
- ASB for transcription factors
- SMC3_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMC3_HUMAN | 1.25 | -1.11 | 1.00 | n/a | n/a | |||
| CTCF_HUMAN | 0.83 | 0.53 | 1.39 | n/a | No Hit |
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