rs671283 chr19:5470399 C>G
- Sequence
ccggcctatcattgtgtttaaagt[C/G]cacagctcctaattgctgaaaaag
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- FOXA2_HUMAN SP5_HUMAN NR2F6_HUMAN FOXA3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA2_HUMAN | 1.89 | -1.62 | 1.33 | n/a | No Hit | |||
| SP5_HUMAN | 2.64 | -3.16 | 1.33 | n/a | n/a | |||
| NR2F6_HUMAN | 1.99 | -1.82 | 1.33 | n/a | n/a | |||
| FOXA3_HUMAN | 2.17 | -2.07 | 1.33 | n/a | No Hit | |||
| RXRB_HUMAN | 2.10 | -1.84 | 1.33 | n/a | No Hit |
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