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rs6712882 chr2:29011088 A>G

Sequence
tcagtgctgtctaagctgggaggc[A/G]gtttacccttgtttactgcagctg
ASB in cell types
Th1-cells GM12878 (female B-cells)
ASB for transcription factors
TBX21_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TBX21_HUMAN -1.72 1.98 1.001.6·10-4 1.33 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP ldl cholesterol years of education
GTEx eQTL Brain_Caudate_basal_ganglia Esophagus_Mucosa Lung Muscle_Skeletal Nerve_Tibial Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Testis Thyroid Whole_Blood

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