rs6719760 chr2:68253634 T>A
- Sequence
agtgtgtgtgtgtgtgtgtgtgtg[T/A]gtgagagagagagagaggatgttt
- ASB in cell types
- K562 (myelogenous leukemia) HEK293 (embryonic kidney) GM12878 (female B-cells)
- ASB for transcription factors
- IKZF1_HUMAN FOXK2_HUMAN MTA2_HUMAN HDAC1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | 1.88 | -1.32 | 2.00 | n/a | No Hit | |||
| FOXK2_HUMAN | 1.35 | -0.38 | 1.83 | n/a | n/a | |||
| MTA2_HUMAN | 1.83 | -1.40 | 2.00 | n/a | n/a | |||
| HDAC1_HUMAN | 1.74 | -0.58 | 2.00 | n/a | n/a | |||
| MNT_HUMAN | 1.87 | -0.46 | 2.00 | n/a | n/a |
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