rs6720691 chr2:230902011 A>G
- Sequence
caaaacaaaaacaaaaacaaaacc[A/G]taaaggtaggtaaggtcatcctct
- ASB in cell types
- VCaP (prostate carcinoma) RWPE2
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| VCaP (prostate carcinoma) | -1.48 | 2.01 | 2.00 | |||
| RWPE2 | -1.19 | 1.48 | 1.00 |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Aorta, Brain_Anterior_cingulate_cortex_BA24, Brain_Caudate_basal_ganglia, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Nucleus_accumbens_basal_ganglia