rs672581 chr19:3307672 C>A
- Sequence
ctaaggggttgctagtcaggacaa[C/A]actctgtccttggtccccaatcct
- ASB in cell types
- K562 (myelogenous leukemia) HEK293 (embryonic kidney)
- ASB for transcription factors
- REST_HUMAN EHMT2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| REST_HUMAN | 0.13 | 1.29 | 1.53 | 1.45 | Weak Concordant | |||
| EHMT2_HUMAN | n/a | 2.58 | 2.00 | n/a | n/a |
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Motif analysis
