ADASTRA v1.6.10
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rs672831
chr2:233858237
G
>
C
Sequence
tagatacttgtgttctattggcaa[G/C]aattttgaagaagtgtaattattg
ASB in cell types
A549 (lung carcinoma)
ASB for transcription factors
RAD21_HUMAN
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Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RAD21_HUMAN
1.07
-0.16
0.02
0.93
1.98
n/a
n/a
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
fasting insulin
,
homa-b
,
homa-ir
,
parkinsons disease
,
serum creatinine
,
total cholesterol
GTEx eQTL
Cells_Cultured_fibroblasts
,
Skin_Sun_Exposed_Lower_leg
,
Testis
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)