rs6731423 chr2:69946195 A>C
- Sequence
tgtcatcccccagaaggcggaaaa[A/C]accattgctgtgaagcattcgagc
- ASB in cell types
- K562 (myelogenous leukemia)
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| K562 (myelogenous leukemia) | -0.13 | 0.58 | 1.98 |
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Motif analysis
No data available
Genetic associations
GRASP 2 hour glucose, asthma, bipolar disorder, eye color, hdl cholesterol, hypertension (early onset hypertension), mitral annular calcium, paternal transmission distortion, rheumatoid arthritis, transmission distortion
GTEx eQTL Brain_Anterior_cingulate_cortex_BA24, Brain_Caudate_basal_ganglia, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Hippocampus, Brain_Nucleus_accumbens_basal_ganglia, Brain_Putamen_basal_ganglia, Cells_Cultured_fibroblasts, Colon_Sigmoid, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Muscle_Skeletal, Pituitary, Stomach, Testis, Whole_Blood