rs67340893 chr17:68379987 A>G
- Sequence
ttgagcgacacggatttgaactgc[A/G]tgggtccacgtaatacatgaattt
- ASB in cell types
- HepG2 (hepatoblastoma) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- RARA_HUMAN CEBPA_HUMAN HLF_HUMAN RXRB_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RARA_HUMAN | 2.61 | n/a | 2.00 | n/a | No Hit | |||
| CEBPA_HUMAN | 2.33 | -2.17 | 2.00 | n/a | No Hit | |||
| HLF_HUMAN | 2.49 | n/a | 2.00 | n/a | No Hit | |||
| RXRB_HUMAN | 2.59 | n/a | 2.00 | n/a | No Hit | |||
| FOXA2_HUMAN | 2.25 | n/a | 2.00 | n/a | No Hit |
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