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rs6734543 chr2:29050717 T>A

Sequence
gtttgcctgccccagcacttatcc[T/A]tcggctggatgacaggcagagcat
ASB in cell types
D341 Med (medulloblastoma)
ASB for transcription factors
OTX2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
OTX2_HUMAN 1.08 -0.18 4.9·10-31.00 1.33 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd body mass index (bmi) ldl cholesterol total cholesterol
GTEx eQTL Esophagus_Mucosa Muscle_Skeletal Skin_Not_Sun_Exposed_Suprapubic Testis

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