rs674081 chr1:20696652 G>A
- Sequence
acagcgggggccgccggccccacc[G/A]ggcttcccgggaaggaagcctccg
- ASB in cell types
- K562 (myelogenous leukemia) lymphoblastoid cells MCF7 (Invasive ductal breast carcinoma) SK-N-SH (neuroblastoma)
- ASB for transcription factors
- RAD21_HUMAN IKZF1_HUMAN ANDR_HUMAN KDM5B_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | 1.83 | -0.46 | 1.67 | n/a | n/a | |||
| IKZF1_HUMAN | 1.70 | 0.02 | 1.33 | n/a | No Hit | |||
| ANDR_HUMAN | 2.18 | -1.64 | 2.25 | n/a | No Hit | |||
| KDM5B_HUMAN | 1.58 | 0.43 | 2.00 | n/a | n/a |
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