rs674102 chr1:20696638 C>G
- Sequence
gccctacttactggacagcggggg[C/G]cgccggccccaccgggcttcccgg
- ASB in cell types
- erythroid cells H1 (embryonic stem cells) MCF7 (Invasive ductal breast carcinoma) lymphoblastoid cells
- ASB for transcription factors
- RAD21_HUMAN IKZF1_HUMAN ANDR_HUMAN VEZF1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | 1.51 | -0.45 | 1.62 | n/a | n/a | |||
| IKZF1_HUMAN | 1.54 | -1.19 | 1.33 | n/a | No Hit | |||
| ANDR_HUMAN | 2.10 | -1.79 | 2.00 | n/a | No Hit | |||
| VEZF1_HUMAN | 2.00 | -2.47 | 1.50 | n/a | No Hit | |||
| KDM5B_HUMAN | 1.46 | 0.07 | 2.00 | n/a | n/a |
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