ADASTRA v1.6.10
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adastra.autosome.org
rs675158
chr13:46339354
C
>
T
Sequence
ttaaatgcttgttttaaggaagca[C/T]gcttctaaaaatgacacacttcac
ASB in cell types
monocyte-derived dendritic cells
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
monocyte-derived dendritic cells
2.14
n/a
0.01
1.00
2.50
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
advanced age-related macular degeneration (geographic atrophy)
,
hdl cholesterol
,
height
,
ldl cholesterol
,
total cholesterol
GTEx eQTL
Artery_Aorta
,
Brain_Cerebellar_Hemisphere
,
Brain_Cerebellum
,
Colon_Sigmoid
,
Colon_Transverse
,
Esophagus_Gastroesophageal_Junction
,
Esophagus_Muscularis
,
Lung
,
Nerve_Tibial
,
Pituitary
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Small_Intestine_Terminal_Ileum
,
Spleen
,
Testis
,
Thyroid
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale