rs67594222 chr7:38704323 C>T
- Sequence
aacctaatatttaccaactcttcc[C/T]agagagagagttaagtaagccttc
- ASB in cell types
- LNCaP (prostate carcinoma) HCC70 (ductal breast carcinoma)
- ASB for transcription factors
- STAT3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT3_HUMAN | 1.73 | -0.90 | 1.75 | -4.68 | Concordant |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Esophagus_Mucosa, Nerve_Tibial, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg