rs6766332 chr3:46059711 A>G
- Sequence
cacttggctgaggactgaatactc[A/G]tgaccaatgtccctgacaaagttt
- ASB in cell types
- CD14+ monocytes monocyte-derived macrophages periferal blood macrophages
- ASB for transcription factors
- BHE40_HUMAN STAT1_HUMAN SPI1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BHE40_HUMAN | -2.62 | 2.44 | 1.33 | 3.23 | Concordant | |||
| STAT1_HUMAN | -3.15 | 2.07 | 2.50 | n/a | No Hit | |||
| SPI1_HUMAN | 0.44 | 1.76 | 1.95 | n/a | No Hit |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Brain_Frontal_Cortex_BA9, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Testis, Thyroid, Whole_Blood