rs6771416 chr3:124620680 G>A
- Sequence
gcctttaacttccagagacagcta[G/A]atggggcagtgagtccagtgagtc
- ASB in cell types
- heart left ventricle liver spleen periferal blood macrophages
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.86 | -0.66 | 1.10 | -3.57 | Concordant | |||
| RAD21_HUMAN | 3.01 | n/a | 1.33 | n/a | n/a |
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Motif analysis
Genetic associations
GTEx eQTL Adrenal_Gland, Esophagus_Mucosa, Liver, Muscle_Skeletal, Pancreas, Skin_Sun_Exposed_Lower_leg, Thyroid, Whole_Blood