rs67733349 chr3:102235878 T>A
- Sequence
gctaagtgatggccaccagatggc[T/A]gtgcatctcaaggaatggagggag
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) Peyer's patch adrenal gland prostate gland
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN GATA3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.37 | 2.25 | 1.45 | 7.53 | Concordant | |||
| RAD21_HUMAN | -2.01 | 1.97 | 1.50 | n/a | n/a | |||
| GATA3_HUMAN | -1.69 | 1.76 | 1.33 | n/a | No Hit |
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Motif analysis
