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rs677643 chr11:86484118 G>A

Sequence
ttctcctcagtggccaagctccac[G/A]gcaggaactgagccatagtaagtt
ASB in cell types
A549 (lung carcinoma)
ASB for transcription factors
EP300_HUMAN GCR_HUMAN JUN_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
EP300_HUMAN -1.38 1.72 1.001.7·10-3 2.00 n/a n/a
GCR_HUMAN -0.24 1.48 1.003.3·10-3 2.00 n/a No Hit
JUN_HUMAN 0.01 1.31 1.000.01 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP ldl cholesterol change with statins
GTEx eQTL Artery_Tibial Esophagus_Muscularis Pancreas

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