rs678347 chr8:101451374 G>A
- Sequence
tggagtttgtcatctagtgagcaa[G/A]gtaaacatgaaatagattgtgaca
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) A549 (lung carcinoma) VCaP (prostate carcinoma) HEK293 (embryonic kidney)
- ASB for transcription factors
- FOXA1_HUMAN ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -0.15 | 1.72 | 1.78 | 4.62 | Concordant | |||
| ESR1_HUMAN | -0.37 | 1.34 | 1.94 | n/a | No Hit |
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Motif analysis
