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rs67859509 chrX:13053334 A>G

Sequence
agagctctctagttgttgtaactt[A/G]aggtaaaaggtgtgtaaccccagt
ASB in cell types
GM12878 (female B-cells)
ASB for transcription factors
MTA2_HUMAN ATF7_HUMAN COT1_HUMAN IKZF1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MTA2_HUMAN n/a 3.21 1.001.4·10-11 1.33 n/a n/a
ATF7_HUMAN n/a 3.19 1.002.5·10-9 1.33 n/a n/a
COT1_HUMAN n/a 3.27 1.009.3·10-8 2.00 n/a No Hit
IKZF1_HUMAN -2.67 2.45 1.006.1·10-6 1.67 n/a No Hit
IKZF2_HUMAN -1.50 2.12 1.008.0·10-5 1.33 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous Heart_Left_Ventricle Nerve_Tibial Ovary Spleen Testis

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