rs6790405 chr3:185070673 C>T
- Sequence
ggacaggaagcattctgtgtccag[C/T]agagagctctgcagccaccagggg
- ASB in cell types
- IPSC-derived bipolar neuron fibroblast of pulmonary artery bipolar neuron SK-N-SH (neuroblastoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.11 | 0.19 | 1.40 | -0.90 | Weak Concordant |
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Motif analysis
