rs679057 chr19:54821146 C>T
- Sequence
atgattgatggatagatagacaga[C/T]agacaattgatagagagatagata
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- CREB1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CREB1_HUMAN | 0.49 | 1.56 | 2.44 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Coronary, Breast_Mammary_Tissue, Colon_Transverse, Heart_Atrial_Appendage, Liver, Lung, Minor_Salivary_Gland, Small_Intestine_Terminal_Ileum, Spleen, Thyroid, Uterus, Vagina, Whole_Blood