rs679352 chr1:201633953 G>T
- Sequence
ggtaggcttccaggaactgggacg[G/T]gaggtcataatagcacttgtagca
- ASB in cell types
- HEK293 (embryonic kidney)
- ASB for transcription factors
- SCRT2_HUMAN ZN335_HUMAN OSR2_HUMAN ZN600_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SCRT2_HUMAN | n/a | 3.69 | 2.00 | n/a | n/a | |||
| ZN335_HUMAN | n/a | 2.95 | 2.00 | -3.70 | Discordant | |||
| OSR2_HUMAN | n/a | 2.83 | 2.00 | n/a | No Hit | |||
| ZN600_HUMAN | -3.65 | 2.43 | 2.00 | n/a | n/a |
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Motif analysis
