rs6802466 chr3:171830191 C>A
- Sequence
agagcaggctcctgagggagacat[C/A]tcctggaacattcgagctgggaca
- ASB in cell types
- PANC1 (pancreatic ductal adenocarcinoma) upper lobe of left lung liver
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.71 | 0.52 | 1.30 | -3.60 | Concordant | |||
| RAD21_HUMAN | 1.33 | 0.48 | 1.33 | n/a | n/a |
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Motif analysis
