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rs680458 chr9:133783443 G>A

Sequence
ccgaggcccgtacccaggtggtag[G/A]gggcagaagtgagcaggcgtggcc
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.87 0.33 7.1·10-30.61 1.58 -0.36 Weak Concordant
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Motif analysis

CTCF_HUMAN Weak Concordant
CTCF_HUMAN pic

Genetic associations

GRASP hdl cholesterol change with statins ldl cholesterol prop taste detection threshold triglycerides change with statins
GTEx eQTL Artery_Tibial Nerve_Tibial

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