rs6807441 chr3:98523003 G>C
- Sequence
ccactccgggccgggccgcggccc[G/C]gggccgaggggccttgtgggagtt
- ASB in cell types
- HCT-116 (colon carcinoma) periferal blood macrophages
- ASB for transcription factors
- SP1_HUMAN SPI1_HUMAN ZFX_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SP1_HUMAN | 1.26 | -0.68 | 1.13 | 1.91 | Weak Discordant | |||
| SPI1_HUMAN | 1.56 | 0.00 | 2.00 | n/a | No Hit | |||
| ZFX_HUMAN | 1.20 | -0.88 | 1.11 | n/a | No Hit |
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Motif analysis
